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Intracelluar compartments and protein sorting

Extracted from pp. 659-678, 689-706, 726-739 and 757-765 of Alberts et al.: Molecular Biology of the Cell, 4th ed. May contain errors - please comment. Updated 20/6 2004.

AB
Nuclear pore complexLarge mulitprotein structure in the nuclear envelope that allows selective transport between nucleus and cytoplasm.
Nuclear localization signal (NLS)Signal sequence or signal patch that directs proteins to the nucleus. Not cleaved off after transport into the nucleus.
ER signal sequenceN-terminal signal sequence of some 20 amino acids that directs proteins to the ER.
Signal peptidaseER membrane protein that cleaves off the ER signal sequence.
Signal recognition particle (SRP)Ribonucleoprotein that binds to a ribosome and an ER signal sequence on a partially synthesized protein.
SRP receptorER membrane protein. Binds the SRP which brings the SRP-ribosome complex to a protein translocator.
Sec61 complexProtein translocator in the ER membrane.
ER retention signalC-terminal signal sequence of 4 amino acids that that retains proteins in the ER.
BiP, calnexin, calreticulinER resident chaperone proteins. Calnexin and calreticulin requires calcium for their activities.
Glycosylphosphatidylinositol (GPI) anchorLipid linkage by which some proteins are bound to the plasma membrane. Formed in the ER.
N-linked glycosylationTransfer of precursor oligosaccharide from dolichol to asparagine side chain in ER. Further modified in ER and Golgi.
O-linked glycosylationAddition of sugars to serine and threonine side chains in Golgi.
Cis Golgi network (CGN) - cis, medial and trans cisternae - trans Golgi network (TGN)Layout of the Golgi apparatus. Proteins arrive from the ER to CGN and are sent on to secretion etc. from TGN.
Complex oligosaccharides, high-mannose oligosaccharidesOutcomes of Golgi modification of oligosaccharides added in ER by N-linked glycosylation.
Vesicular transport model, cisternal maturation modelTwo models of transport through the Golgi apparatus. Not mutually exclusive.
Constitutive resp. regulated secretory pathway.The two secretory pathways. The first operates continously in all cells, the second in specialized secretory cells when stimulated.


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