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HIV Biology 01

AB
testing sensitivityThe percentage of the results that will be positive when HIV is present
testing specificityThe percentage of the results that will be negative when HIV not present.
humoral immunityexogenous, antibody-mediated; (involves humours of the body)
plasma cellsAPC; differentiate from B cells upon stimulation by CD4+ lymphocytes
delayed-type hypersensitivity (T_h1) responsetakes 2-3 days to develop; 1. CD8 + CD4 recognize antigen+MHC-I/II 2. MO (APC) release IL-1, stimulating CD4 proliferation
innate immunityinvolves the inflammatory response, body temperature, lysozyme, complement, interferon and stomach acid
specific/adaptive immunityspecificity, diversity, memory, and self/non-self recognition; activated by innate immune response
anergylack of reaction by the body's defence mechanisms when foreign substances come into contact with the body; indicates lack of immune response
western blot test / immunoblotuses gel electrophoresis to separate denatured proteins by mass. The proteins are then transferred out of the gel and onto a membrane, where they are "probed" using antibodies specific to the protein
ELISA assay(Enzyme-Linked ImmunoSorbent Assay); used to detect presence of antigen or antibody
enhancing antibodyan antibody that enhances or promotes -- rather than inhibits disease progression
neutralizing antibodyform of antibody that reacts with an infectious agent and destroys or inhibits its infectivity and virulence
lymph node regions1. cortex 2. paracortex 3. medulla
T helper/effector cellsinvolved in activating and directing other immune cells; no cytotoxic or phagocytic activity; they cannot kill infected host (also known as somatic) cells or pathogens, and without other immune cells they would usually be considered useless against an infection
T_h1 cellsproduce IFN-γ and TNF-β; maximises the killing efficacy of the macrophages and in the proliferation of cytotoxic CD8+ T cells, and it has been suggested that their primary role during an immune response is to activate and/or proliferate the cellular immune system
T_h2 cellsproduce IL-4, 5, 13; express a variety of cytokines, many of which stimulate B-cells into proliferation, to induce B-cell antibody class switching, and to increase antibody production. Th2 cells are therefore considered necessary for the full maturation of the humoral immune system
Antibody-Dependent Cellular Cytotoxicity (ADCC)1. Recognition of the infected cell by Fc receptors on the surface of the effector (NK) cell. 2. Effector cell's Fc receptors recognize the Fc (constant) portion of antibodies bound to the surface of a pathogen-infected cell
Three Mechanisms of Cell-Mediated Immunity1. Natural Killer Cells (NK Cells) 2. Cytotoxic T-Lymphocytes (CTL) 3. Antibody-Dependent Cellular Cytotoxicity (ADCC)
syncytiuma large region of cytoplasm that contains many nuclei; may form by not undergoing cytokinesis (post-S-phase) or viral fusion proteins (ie GP-41) cause cellular fusion with neighboring cells
Steps In Activation of naïve helper T cellsINCOMPLETE
TNF(tumor necrosis factor); causes the necrosis of some tumors, but may stimulate the growth of others; stimulates MO phagocytosis; promotes inflammatory response
interleukincytokines expressed by leukocytes (as well as other cells) for intercellular communication
IL-2secreted by T cells, stimulates growth and differentiation of T cell response
IL-10inhibits Th1 cytokine production
IL-4involved in proliferation of B cells, and the development of T cells and mast cells. Important role in allergic responses.
IFN-γ / type II interferoncytokine; secreted by T-lymphocytes and NK cells; activates APCs and promotes Th1 differentiation
CAFINCOMPLETE (cellular antiviral factor)
DC-SIGNtransmembrane protein on dendritic cells; 1. Binds HIV 2. Transports to lymph nodes 3. Infects T-cells
Steps of HIV Entry into Target Cells1. Binding (of virus to receptors) 2. Binding (of GP120, co-receptor to cell) 3. Fusion (viral envelope & plasma membrane) 4. Reverse transcription (viral RNA to DNA) 5. Entry into nucleus 6. Integration (into host DNA)
CD4+ T-lymphocytes / Helper T cellsrelease cytokines; main HIV target (one of); orchestrates immune system
CD8+ T-lymphocytes / Cytotoxic T-cellsdestroys cancer cells & virally-infected cells
GAG[Group-specific AntiGen] gene coding for structural proteins
POLgene coding for viral enzymes (reverse transcriptase, integrase, protease)
ENV[ENVelope] coding for GP-120, GP-41
GP-120[GlycoProtein 120] binde to CD4 receptor on host cell; can fall off and circulate in the blood (a. induces apoptosis, b. induces syncytia, c. interferes with T-cell formation)
GP-41[GlycoProtein 41] (upon GP-120 binding) conformational change - fusion with host cell; can fall off of virion and into blood, inhibiting proliferation of T-cells
TAT[TransActivator of Transcription] causes apoptosis of surrounding cells; inhibits CD4+ lymphocyte proliferation and susceptibility to HIV; affects brain tissue, causes KS lesions
APOBEC3G[APOlipoprotein B Enzyme, Catalytic polypeptide-like 3G] human protein interfering with HIV replication
REV[REgulator of Virion] allows export of HIV mRNA to be exported from nucleus to cytoplasm; acts like scorpion toxin on brain tissue; necessary for TAT expression
VIF[Viral Infectivity Factor] inhibits APOBEC3G from entering virion during budding and killing it
VPR[Viral Protein R] regulates nuclear import of HIV; induces apoptosis (CD4+); activates HIV in low concentrations; affects thymus gland (atrophy)
VPU[Viral Protein U] involved in viral budding; decreases cell-mediated reponse
cytokine/lymphokine/interleukin/chemokineproteinaceous signalling compound for inter-cell cummunication of immune system
CCR5 (gene & receptor)[Chemokine (C-C motif) Receptor 5] on T-cells/MO/dendritic cells/microglia; one of major co-receptors used by HIV; used by M-tropic, wild (NSI) strains
CXCR4/fusin[Chemokine (C-X-C motif) Receptor 4] T-tropic; usually on late mutant (SI) strains
LTRINCOMPLETE
TARINCOMPLETE
B cells"Born" in bone marrow; differentiate into plasma & memory B-cells; produce antibodies against soluble antigens
HIV receptors1. CD4; 2. Galactosyl ceramide (brain & bowel); 3. Fc (MO); Complement (MO)
Major fusion co-receptors1. CCR5/CKR5 (on MO) - primary infection; 2. CXCR4 (on T-cells) - later, progressive infection
TAR[TAt Responsive element] prevents RNA polymerase from falling off (increasing transcription efficiency)
NEF[NEgative regulatory Factor] downmodulates expression of MHC-I/II, CD4+/CD8+ T-cells; causes apoptosis in uninfected cells; inhibits apoptosis in infected cells; promotes chemokine release in MO; acts like scorpion toxin on brain tissue
NFkB[Nuclear Factor Kappa B] transcription factor involved in conversion from latent to lytic state
3 HIV Regulatory Proteins1. TAT (TransActivator of Transcription); 2. REV (REgulator of Virion); 3. NEF (NEgative regulatory Factor)
3 HIV Structural/Enzymatic Proteins1. GAG (Group-specific AntiGen); 2. ENV (ENVelope); 3. POL
3 Parts of HIV Reverse Transcriptase Complex1. RNA polymerase (copies RNS to single-stranded DNA); 2. Ribonuclease (destroys RNA copy after DNA copy is made); 3. DNA Polymerase (copies DNA to double-stranded DNA)
FcINCOMPLETE
complementgroup of circulating serum proteins; among other things, triggers the membrane attack complex (MAC) to lyse target cell
lysozymeenzyme in mucous sectretions that can degrade bacterial cell walls
interferonsgroup of proteins produced by virally-infected cells; binds to uninfected cells, making them resistant to viral infection
SLPI[Secretory Leukocyte Protease Inhibitor] binds leukocytes, blocking HIV infection; contained in saliva, breastmilk, genital secretions
4 Main Types of Phagocytic CellsA. Blood: 1. Monocytes, 2. Neutrophils; B. Tissue: 1. Macrophages, 2. Dendritic cells
4 Cardinal Signs of Inflammation1. Rubor (redness); 2. Tumor (swelling); 3. Calore (heat); 4. Dolore (pain) {5. Functio laesa (loss of function)}
diapedesisemigration of phagocytes between capillary endothelial cells into the tissue during inflammation
erythrocytesred blood cells; undergo aptosis after 120 days
FDC[Follicular Dendritic Cells] filter antibody-bound antigens from circulating lymph; may be infected by free viral particles, then subsequently infect CD4+ cells in circulation
autofusionGP-120 + CD4 on same cell causes membrane to fold, become misshapen - induces cellular lysis
superantigensantigens capable of interacions with a large number of T-cells (including MHC-II + T-cell receptor on APCs)
FAS ligandINCOMPLETE

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